CSBL publications
2017
Lista de serviços
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C5aR1 signaling triggers lung immunopathology in COVID-19 through neutrophil extracellular traps 2023C5aR1 signaling triggers lung immunopathology in COVID-19 through neutrophil extracellular traps
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Ten quick tips for harnessing the power of ChatGPT in computational biology 2023Ten quick tips for harnessing the power of ChatGPT in computational biology
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COVID-19-related hyperglycemia is associated with infection of hepatocytes and stimulation of gluconeogenesis 2023COVID-19-related hyperglycemia is associated with infection of hepatocytes and stimulation of gluconeogenesis
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Characteristics and anatomic location of PD-1(+)TCF1(+) stem-like CD8 T cells in chronic viral infection and cancer 2023Characteristics and anatomic location of PD-1(+)TCF1(+) stem-like CD8 T cells in chronic viral infection and cancer
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Morphological, cellular, and molecular basis of brain infection in COVID-19 patients 2022Morphological, cellular, and molecular basis of brain infection in COVID-19 patients
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Pyruvate kinase M2 mediates IL-17 signaling in keratinocytes driving psoriatic skin inflammation 2022Pyruvate kinase M2 mediates IL-17 signaling in keratinocytes driving psoriatic skin inflammation
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Transcriptomic signatures induced by the Ebola virus vaccine rVSV-ZEBOV-GP in adult cohorts in Europe, Africa, and North America: a molecular biomarker study 2022Transcriptomic signatures induced by the Ebola virus vaccine rVSV-ZEBOV-GP in adult cohorts in Europe, Africa, and North America: a molecular biomarker study
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Hidden in plain sight: uncovering the role of CREB1 in HIV-1 vaccine-induced immunity 2021Hidden in plain sight: uncovering the role of CREB1 in HIV-1 vaccine-induced immunity
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Inflammation induced by influenza virus impairs human innate immune control of pneumococcus. 2018Inflammation induced by influenza virus impairs human innate immune control of pneumococcus.
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Long non-coding RNAs associated with infection and vaccine-induced immunity 2021Long non-coding RNAs associated with infection and vaccine-induced immunity
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Metabolic Phenotypes of Response to Vaccination in Humans. 2017Metabolic Phenotypes of Response to Vaccination in Humans.
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Molecular alterations in the extracellular matrix in the brains of newborns with congenital Zika syndrome. 2020Molecular alterations in the extracellular matrix in the brains of newborns with congenital Zika syndrome.
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Long noncoding RNAs are involved in multiple immunological pathways in response to vaccination. 2019Long noncoding RNAs are involved in multiple immunological pathways in response to vaccination.
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Sepsis expands a CD39(+) plasmablast population that promotes immunosuppression via adenosine-mediated inhibition of macrophage antimicrobial activity 2021Sepsis expands a CD39(+) plasmablast population that promotes immunosuppression via adenosine-mediated inhibition of macrophage antimicrobial activity
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Systems analysis of subjects acutely infected with the Chikungunya virus. 2019Systems analysis of subjects acutely infected with the Chikungunya virus.
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Network vaccinology. 2020Network vaccinology.
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Elevated Glucose Levels Favor SARS-CoV-2 Infection and Monocyte Response through a HIF-1α/Glycolysis-Dependent Axis. 2020Elevated Glucose Levels Favor SARS-CoV-2 Infection and Monocyte Response through a HIF-1α/Glycolysis-Dependent Axis.
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Evolution and epidemic spread of SARS-CoV-2 in Brazil. 2020Evolution and epidemic spread of SARS-CoV-2 in Brazil.
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Defining CD8+ T cells that provide the proliferative burst after PD-1 therapy. 2016Defining CD8+ T cells that provide the proliferative burst after PD-1 therapy.
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The amino acid sensor GCN2 controls gut inflammation by inhibiting inflammasome activation. 2016The amino acid sensor GCN2 controls gut inflammation by inhibiting inflammasome activation.
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Vaccine activation of the nutrient sensor GCN2 in dendritic cells enhances antigen presentation. 2014Vaccine activation of the nutrient sensor GCN2 in dendritic cells enhances antigen presentation.
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Defining antigen-specific plasmablast and memory B cell subsets in human blood after viral infection or vaccination. 2016Defining antigen-specific plasmablast and memory B cell subsets in human blood after viral infection or vaccination.
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Programming the magnitude and persistence of antibody responses with innate immunity. 2011Programming the magnitude and persistence of antibody responses with innate immunity.
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Molecular signatures of antibody responses derived from a systems biology study of five human vaccines. 2014Molecular signatures of antibody responses derived from a systems biology study of five human vaccines.
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Specific inhibition of NLRP3 in chikungunya disease reveals a role for inflammasomes in alphavirus-induced inflammation. 2017Specific inhibition of NLRP3 in chikungunya disease reveals a role for inflammasomes in alphavirus-induced inflammation.
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Activation of beta-catenin in dendritic cells regulates immunity versus tolerance in the intestine. 2010Activation of beta-catenin in dendritic cells regulates immunity versus tolerance in the intestine.
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Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures. 2015Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.
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Prior upregulation of interferon pathways in the nasopharynx impacts viral shedding following live attenuated influenza vaccine challenge in children 2022Prior upregulation of interferon pathways in the nasopharynx impacts viral shedding following live attenuated influenza vaccine challenge in children
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TLR5-mediated sensing of gut microbiota is necessary for antibody responses to seasonal influenza vaccination. 2014TLR5-mediated sensing of gut microbiota is necessary for antibody responses to seasonal influenza vaccination.
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Chronic but not acute virus infection induces sustained expansion of myeloid suppressor cell numbers that inhibit viral-specific T cell immunity. 2013Chronic but not acute virus infection induces sustained expansion of myeloid suppressor cell numbers that inhibit viral-specific T cell immunity.
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Systems biology of vaccination for seasonal influenza in humans. 2011Systems biology of vaccination for seasonal influenza in humans.
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The T helper type 2 response to cysteine proteases requires dendritic cell-basophil cooperation via ROS-mediated signaling. 2010The T helper type 2 response to cysteine proteases requires dendritic cell-basophil cooperation via ROS-mediated signaling.
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PD-1/PD-L1 blockade abrogates a dysfunctional innate-adaptive immune axis in critical beta-coronavirus disease 2022PD-1/PD-L1 blockade abrogates a dysfunctional innate-adaptive immune axis in critical beta-coronavirus disease
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Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans. 2009Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans.
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Systems vaccinology. 2010Systems vaccinology.
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Knockout of cellular prion protein in glioblastoma affects the expression of Wnt signaling genes 2022Knockout of cellular prion protein in glioblastoma affects the expression of Wnt signaling genes
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PD-1/PD-L1 inhibition enhances chemotherapy-induced neuropathic pain by suppressing neuroimmune antinociceptive signaling 2022PD-1/PD-L1 inhibition enhances chemotherapy-induced neuropathic pain by suppressing neuroimmune antinociceptive signaling
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Determinants of antibody persistence across doses and continents after single-dose rVSV-ZEBOV vaccination for Ebola virus disease: an observational cohort study. 2018Determinants of antibody persistence across doses and continents after single-dose rVSV-ZEBOV vaccination for Ebola virus disease: an observational cohort study.
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MS-Driven Metabolic Alterations Are Recapitulated in iPSC-Derived Astrocytes 2022MS-Driven Metabolic Alterations Are Recapitulated in iPSC-Derived Astrocytes
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Tissue-resident glial cells associate with tumoral vasculature and promote cancer progression 2022Tissue-resident glial cells associate with tumoral vasculature and promote cancer progression
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Aryl hydrocarbon receptor (AhR) activation contributes to high fat diet induced vascular dysfunction 2022Aryl hydrocarbon receptor (AhR) activation contributes to high fat diet induced vascular dysfunction
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Daily Rhythms of TNFα Expression and Food Intake Regulate Synchrony of Plasmodium Stages with the Host Circadian Cycle. 2018Daily Rhythms of TNFα Expression and Food Intake Regulate Synchrony of Plasmodium Stages with the Host Circadian Cycle.
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Systems analysis of protective immune responses to RTS,S malaria vaccination in humans. 2017Systems analysis of protective immune responses to RTS,S malaria vaccination in humans.
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Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells. 2018Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells.
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Canonical PI3Kγ signaling in myeloid cells restricts Trypanosoma cruzi infection and dampens chagasic myocarditis. 2018Canonical PI3Kγ signaling in myeloid cells restricts Trypanosoma cruzi infection and dampens chagasic myocarditis.
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Efferocytosis of SARS-CoV-2-infected dying cells impairs macrophage anti-inflammatory functions and clearance of apoptotic cells 2022Efferocytosis of SARS-CoV-2-infected dying cells impairs macrophage anti-inflammatory functions and clearance of apoptotic cells
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Crucial role for T cell-intrinsic IL-18R-MyD88 signaling in cognate immune response to intracellular parasite infection. 2017Crucial role for T cell-intrinsic IL-18R-MyD88 signaling in cognate immune response to intracellular parasite infection.
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Systems biology of immunity to MF59-adjuvanted versus nonadjuvanted trivalent seasonal influenza vaccines in early childhood. 2016Systems biology of immunity to MF59-adjuvanted versus nonadjuvanted trivalent seasonal influenza vaccines in early childhood.
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Differentiation of Memory CD8 T Cells Unravel Gene Expression Pattern Common to Effector and Memory Precursors 2022Differentiation of Memory CD8 T Cells Unravel Gene Expression Pattern Common to Effector and Memory Precursors
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Insight Into the Long Noncoding RNA and mRNA Coexpression Profile in the Human Blood Transcriptome Upon Leishmania infantum Infection. 2022Insight Into the Long Noncoding RNA and mRNA Coexpression Profile in the Human Blood Transcriptome Upon Leishmania infantum Infection.
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SARS-CoV-2 infected children form early immune memory responses dominated by nucleocapsid-specific CD8+ T cells and antibodies 2022SARS-CoV-2 infected children form early immune memory responses dominated by nucleocapsid-specific CD8+ T cells and antibodies
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Molecular alterations in human milk in simulated maternal nasal mucosal infection with live attenuated influenza vaccination 2022Molecular alterations in human milk in simulated maternal nasal mucosal infection with live attenuated influenza vaccination
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Initial viral load determines the magnitude of the human CD8 T cell response to yellow fever vaccination. 2015Initial viral load determines the magnitude of the human CD8 T cell response to yellow fever vaccination.
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Systems Biology Analysis of the Radiation-Attenuated Schistosome Vaccine Reveals a Role for Growth Factors in Protection and Hemostasis Inhibition in Parasite Survival. 2021Systems Biology Analysis of the Radiation-Attenuated Schistosome Vaccine Reveals a Role for Growth Factors in Protection and Hemostasis Inhibition in Parasite Survival.
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Acute Inflammation Is a Predisposing Factor for Weight Gain and Insulin Resistance 2022Acute Inflammation Is a Predisposing Factor for Weight Gain and Insulin Resistance
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The evolution of knowledge on genes associated with human diseases 2022The evolution of knowledge on genes associated with human diseases
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Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci. 2018Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci.
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Flavivirus-Mediating B Cell Differentiation Into Antibody-Secreting Cells in Humans Is Associated With the Activation of the Tryptophan Metabolism. 2020Flavivirus-Mediating B Cell Differentiation Into Antibody-Secreting Cells in Humans Is Associated With the Activation of the Tryptophan Metabolism.
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Platelet-monocyte interaction amplifies thromboinflammation through tissue factor signaling in COVID-19 2022Platelet-monocyte interaction amplifies thromboinflammation through tissue factor signaling in COVID-19
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Dengue virus infection induces expansion of a CD14(+)CD16(+) monocyte population that stimulates plasmablast differentiation. 2014Dengue virus infection induces expansion of a CD14(+)CD16(+) monocyte population that stimulates plasmablast differentiation.
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Uptake of Plasmodium chabaudi hemozoin drives Kupffer cell death and fuels superinfections 2022Uptake of Plasmodium chabaudi hemozoin drives Kupffer cell death and fuels superinfections
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HIV infection increases the risk of acquiring Plasmodium vivax malaria: a 4-year cohort study in the Brazilian Amazon HIV and risk of vivax malaria 2022HIV infection increases the risk of acquiring Plasmodium vivax malaria: a 4-year cohort study in the Brazilian Amazon HIV and risk of vivax malaria
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Severe COVID-19 shares a common neutrophil activation signature with other acute inflammatory states 2022Severe COVID-19 shares a common neutrophil activation signature with other acute inflammatory states
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Exacerbation of Chikungunya Virus Rheumatic Immunopathology by a High Fiber Diet and Butyrate. 2019Exacerbation of Chikungunya Virus Rheumatic Immunopathology by a High Fiber Diet and Butyrate.
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Neonatal T Follicular Helper Cells Are Lodged in a Pre-T Follicular Helper Stage Favoring Innate Over Adaptive Germinal Center Responses. 2019Neonatal T Follicular Helper Cells Are Lodged in a Pre-T Follicular Helper Stage Favoring Innate Over Adaptive Germinal Center Responses.
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Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer. 2004Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer.
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Big Data and machine learning in cancer theranostics 2022Big Data and machine learning in cancer theranostics
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Acute Zika Virus Infection in an Endemic Area Shows Modest Proinflammatory Systemic Immunoactivation and Cytokine-Symptom Associations. 2018Acute Zika Virus Infection in an Endemic Area Shows Modest Proinflammatory Systemic Immunoactivation and Cytokine-Symptom Associations.
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Tucuxi-BLAST: Enabling fast and accurate record linkage of large-scale health-related administrative databases through a DNA-encoded approach 2022Tucuxi-BLAST: Enabling fast and accurate record linkage of large-scale health-related administrative databases through a DNA-encoded approach
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Automatic detection of the parasite Trypanosoma cruzi in blood smears using a machine learning approach applied to mobile phone images 2022Automatic detection of the parasite Trypanosoma cruzi in blood smears using a machine learning approach applied to mobile phone images
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Distinct TLR adjuvants differentially stimulate systemic and local innate immune responses in nonhuman primates. 2012Distinct TLR adjuvants differentially stimulate systemic and local innate immune responses in nonhuman primates.
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Lower temperatures reduce type I interferon activity and promote alphaviral arthritis. 2017Lower temperatures reduce type I interferon activity and promote alphaviral arthritis.
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Cross-sectional analysis of students and school workers reveals a high number of asymptomatic SARS-CoV-2 infections during school reopening in Brazilian cities 2022Cross-sectional analysis of students and school workers reveals a high number of asymptomatic SARS-CoV-2 infections during school reopening in Brazilian cities
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Induction of Cell Cycle and NK Cell Responses by Live-Attenuated Oral Vaccines against Typhoid Fever. 2017Induction of Cell Cycle and NK Cell Responses by Live-Attenuated Oral Vaccines against Typhoid Fever.
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Global blood miRNA profiling unravels early signatures of immunogenicity of Ebola vaccine rVSVΔG-ZEBOV-GP 2023Global blood miRNA profiling unravels early signatures of immunogenicity of Ebola vaccine rVSVΔG-ZEBOV-GP
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Transcriptome analysis of six tissues obtained post-mortem from sepsis patients 2023Transcriptome analysis of six tissues obtained post-mortem from sepsis patients
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Cutting Edge: Polycomb Repressive Complex 1 Subunit Cbx4 Positively Regulates Effector Responses in CD8 T Cells 2023Cutting Edge: Polycomb Repressive Complex 1 Subunit Cbx4 Positively Regulates Effector Responses in CD8 T Cells
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S100A9 Drives the Chronification of Psoriasiform Inflammation by Inducing IL-23/Type 3 Immunity 2023S100A9 Drives the Chronification of Psoriasiform Inflammation by Inducing IL-23/Type 3 Immunity
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CASP4/11 Contributes to NLRP3 Activation and COVID-19 Exacerbation 2023CASP4/11 Contributes to NLRP3 Activation and COVID-19 Exacerbation
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Clinical markers of post-Chikungunya chronic inflammatory joint disease: A Brazilian cohort 2023Clinical markers of post-Chikungunya chronic inflammatory joint disease: A Brazilian cohort
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The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation. 2013The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation.
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Gene Signatures of Symptomatic and Asymptomatic Clinical-Immunological Profiles of Human Infection by Leishmania (L.) chagasi in Amazonian Brazil 2023Gene Signatures of Symptomatic and Asymptomatic Clinical-Immunological Profiles of Human Infection by Leishmania (L.) chagasi in Amazonian Brazil
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Integrative systems immunology uncovers molecular networks of the cell cycle that stratify COVID-19 severity 2023Integrative systems immunology uncovers molecular networks of the cell cycle that stratify COVID-19 severity
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Tissue-resident glial cells associate with tumoral vasculature and promote cancer progression 2023Tissue-resident glial cells associate with tumoral vasculature and promote cancer progression
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Antibody responses to recombinant vesicular stomatitis virus-Zaire Ebolavirus vaccination for Ebola virus disease across doses and continents: 5-year durability 2023Antibody responses to recombinant vesicular stomatitis virus-Zaire Ebolavirus vaccination for Ebola virus disease across doses and continents: 5-year durability
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Thinking out of the box: revisiting health surveillance based on medical records 2023Thinking out of the box: revisiting health surveillance based on medical records
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Increased mTOR Signaling and Impaired Autophagic Flux Are Hallmarks of SARS-CoV-2 Infection. 2022Increased mTOR Signaling and Impaired Autophagic Flux Are Hallmarks of SARS-CoV-2 Infection.
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Combining IP(3) affinity chromatography and bioinformatics reveals a novel protein-IP(3) binding site on Plasmodium falciparum MDR1 transporter. 2022Combining IP(3) affinity chromatography and bioinformatics reveals a novel protein-IP(3) binding site on Plasmodium falciparum MDR1 transporter.
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SARS-CoV-2 uses CD4 to infect T helper lymphocytes 2023SARS-CoV-2 uses CD4 to infect T helper lymphocytes
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Comparative transcriptomic analysis of long noncoding RNAs in Leishmania-infected human macrophages 2023Comparative transcriptomic analysis of long noncoding RNAs in Leishmania-infected human macrophages
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Expression of HMGCS2 in intestinal epithelial cells is downregulated in inflammatory bowel disease associated with endoplasmic reticulum stress 2023Expression of HMGCS2 in intestinal epithelial cells is downregulated in inflammatory bowel disease associated with endoplasmic reticulum stress
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Baseline gene signatures of reactogenicity to Ebola vaccination: a machine learning approach across multiple cohorts 2023Baseline gene signatures of reactogenicity to Ebola vaccination: a machine learning approach across multiple cohorts
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Immunodominant antibody responses directed to SARS-CoV-2 hotspot mutation sites and risk of immune escape 2023Immunodominant antibody responses directed to SARS-CoV-2 hotspot mutation sites and risk of immune escape
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Chikungunya patient transcriptional signatures faithfully recapitulated in a C57BL/6J mouse model 2022Chikungunya patient transcriptional signatures faithfully recapitulated in a C57BL/6J mouse model
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Novel therapeutic avenues for the study of chronic liver disease and regeneration: The foundation of the Iberoamerican Consortium for the study of liver Cirrhosis 2023Novel therapeutic avenues for the study of chronic liver disease and regeneration: The foundation of the Iberoamerican Consortium for the study of liver Cirrhosis
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Identification of pathogenic variants in the Brazilian cohort with Familial hypercholesterolemia using exon-targeted gene sequencing 2023Identification of pathogenic variants in the Brazilian cohort with Familial hypercholesterolemia using exon-targeted gene sequencing
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Imbalanced IL-1B and IL-18 Expression in Sézary Syndrome 2023Imbalanced IL-1B and IL-18 Expression in Sézary Syndrome
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Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine. 2021Human Transcriptomic Response to the VSV-Vectored Ebola Vaccine.
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Linking proteomic alterations in schizophrenia hippocampus to NMDAr hypofunction in human neurons and oligodendrocytes. 2021Linking proteomic alterations in schizophrenia hippocampus to NMDAr hypofunction in human neurons and oligodendrocytes.
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An Experimental DUAL Model of Advanced Liver Damage 2021An Experimental DUAL Model of Advanced Liver Damage
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In-depth analysis of laboratory parameters reveals the interplay between sex, age, and systemic inflammation in individuals with COVID-19. 2021In-depth analysis of laboratory parameters reveals the interplay between sex, age, and systemic inflammation in individuals with COVID-19.
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Pneumococcal colonization impairs mucosal immune responses to live attenuated influenza vaccine. 2021Pneumococcal colonization impairs mucosal immune responses to live attenuated influenza vaccine.
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Melatonin-Index as a biomarker for predicting the distribution of presymptomatic and asymptomatic SARS-CoV-2 carriers 2021Melatonin-Index as a biomarker for predicting the distribution of presymptomatic and asymptomatic SARS-CoV-2 carriers
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Profiling plasma-extracellular vesicle proteins and microRNAs in diabetes onset in middle-aged male participants in the ELSA-Brasil study. 2021Profiling plasma-extracellular vesicle proteins and microRNAs in diabetes onset in middle-aged male participants in the ELSA-Brasil study.
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Colorimetric RT-LAMP SARS-CoV-2 diagnostic sensitivity relies on color interpretation and viral load 2021Colorimetric RT-LAMP SARS-CoV-2 diagnostic sensitivity relies on color interpretation and viral load
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Kdm6b Regulates the Generation of Effector CD8 + T Cells by Inducing Chromatin Accessibility in Effector-Associated Genes 2021Kdm6b Regulates the Generation of Effector CD8 + T Cells by Inducing Chromatin Accessibility in Effector-Associated Genes
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Why should obese youth be prioritized in COVID-19 vaccination programs? A nationwide retrospective study 2022Why should obese youth be prioritized in COVID-19 vaccination programs? A nationwide retrospective study
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Biological sex influences antibody responses to routine vaccinations in the first year of life. 2020Biological sex influences antibody responses to routine vaccinations in the first year of life.
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Systems immunology of flavivirus infection. 2021Systems immunology of flavivirus infection.
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Zika virus infection and cytokines. 2021Zika virus infection and cytokines.
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Drug repositioning for psychiatric and neurological disorders through a network medicine approach. 2020Drug repositioning for psychiatric and neurological disorders through a network medicine approach.
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São Paulo School of Advanced Sciences on Vaccines: an overview. 2020São Paulo School of Advanced Sciences on Vaccines: an overview.
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ACE2 Expression Is Increased in the Lungs of Patients With Comorbidities Associated With Severe COVID-19. 2020ACE2 Expression Is Increased in the Lungs of Patients With Comorbidities Associated With Severe COVID-19.
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Genomics, epigenomics and pharmacogenomics of Familial Hypercholesterolemia (FHBGEP): A study protocol. 2020Genomics, epigenomics and pharmacogenomics of Familial Hypercholesterolemia (FHBGEP): A study protocol.
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Proteomics reveals disturbances in the immune response and energy metabolism of monocytes from patients with septic shock. 2021Proteomics reveals disturbances in the immune response and energy metabolism of monocytes from patients with septic shock.
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miRNAs may play a major role in the control of gene expression in key pathobiological processes in Chagas disease cardiomyopathy. 2020miRNAs may play a major role in the control of gene expression in key pathobiological processes in Chagas disease cardiomyopathy.
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Platelet disturbances correlate with endothelial cell activation in uncomplicated Plasmodium vivax malaria. 2020Platelet disturbances correlate with endothelial cell activation in uncomplicated Plasmodium vivax malaria.
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Rapid dose-dependent Natural Killer (NK) cell modulation and cytokine responses following human rVSV-ZEBOV Ebolavirus vaccination. 2020Rapid dose-dependent Natural Killer (NK) cell modulation and cytokine responses following human rVSV-ZEBOV Ebolavirus vaccination.
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Network Medicine: Methods and Applications 2020Network Medicine: Methods and Applications
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Pediatric COVID-19 patients in South Brazil show abundant viral mRNA and strong specific anti-viral responses 2021Pediatric COVID-19 patients in South Brazil show abundant viral mRNA and strong specific anti-viral responses
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Whole-Genome Sequencing of Leishmania infantum chagasi Isolates from Honduras and Brazil 2021Whole-Genome Sequencing of Leishmania infantum chagasi Isolates from Honduras and Brazil
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Immature neutrophil signature associated with the sexual dimorphism of systemic juvenile idiopathic arthritis. 2020Immature neutrophil signature associated with the sexual dimorphism of systemic juvenile idiopathic arthritis.
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The relationship between cytokine and neutrophil gene network distinguishes SARS-CoV-2-infected patients by sex and age. 2021The relationship between cytokine and neutrophil gene network distinguishes SARS-CoV-2-infected patients by sex and age.
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Neuroinflammation at single cell level: What is new? 2020Neuroinflammation at single cell level: What is new?
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Antigenicity prediction and vaccine recommendation of human influenza virus A (H3N2) using convolutional neural networks. 2020Antigenicity prediction and vaccine recommendation of human influenza virus A (H3N2) using convolutional neural networks.
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Methods for predicting vaccine immunogenicity and reactogenicity. 2020Methods for predicting vaccine immunogenicity and reactogenicity.
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Acid pH Increases SARS-CoV-2 Infection and the Risk of Death by COVID-19 2021Acid pH Increases SARS-CoV-2 Infection and the Risk of Death by COVID-19
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Editorial: User-Friendly Tools Applied to Genetics or Systems Biology. 2020Editorial: User-Friendly Tools Applied to Genetics or Systems Biology.
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P2x7 Receptor Signaling Blockade Reduces Lung Inflammation and Necrosis During Severe Experimental Tuberculosis. 2021P2x7 Receptor Signaling Blockade Reduces Lung Inflammation and Necrosis During Severe Experimental Tuberculosis.
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Hydroquinone exposure alters the morphology of lymphoid organs in vaccinated C57Bl/6 mice. 2020Hydroquinone exposure alters the morphology of lymphoid organs in vaccinated C57Bl/6 mice.
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Total parasite biomass but not peripheral parasitaemia is associated with endothelial and haematological perturbations in Plasmodium vivax patients 2021Total parasite biomass but not peripheral parasitaemia is associated with endothelial and haematological perturbations in Plasmodium vivax patients
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Variants in the Kisspeptin-GnRH Pathway Modulate the Hormonal Profile and Reproductive Outcomes. 2020Variants in the Kisspeptin-GnRH Pathway Modulate the Hormonal Profile and Reproductive Outcomes.
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Toward an Integrated View of Operational Tolerance in Human Renal Transplantation: A Systems Biology Perspective. 2020Toward an Integrated View of Operational Tolerance in Human Renal Transplantation: A Systems Biology Perspective.
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Susceptibility of the Elderly to SARS-CoV-2 Infection: ACE-2 Overexpression, Shedding, and Antibody-dependent Enhancement (ADE). 2020Susceptibility of the Elderly to SARS-CoV-2 Infection: ACE-2 Overexpression, Shedding, and Antibody-dependent Enhancement (ADE).
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Gene signatures of autopsy lungs from obese patients with COVID-19. 2021Gene signatures of autopsy lungs from obese patients with COVID-19.
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Noninvasive prenatal paternity determination using microhaplotypes: a pilot study. 2020Noninvasive prenatal paternity determination using microhaplotypes: a pilot study.
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Gasdermin D inhibition prevents multiple organ dysfunction during sepsis by blocking NET formation. 2021Gasdermin D inhibition prevents multiple organ dysfunction during sepsis by blocking NET formation.
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OUTBREAK: a user-friendly georeferencing online tool for disease surveillance. 2021OUTBREAK: a user-friendly georeferencing online tool for disease surveillance.
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Gene profiling of Chikungunya virus arthritis in a mouse model reveals significant overlap with rheumatoid arthritis. 2012Gene profiling of Chikungunya virus arthritis in a mouse model reveals significant overlap with rheumatoid arthritis.
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webCEMiTool: Co-expression Modular Analysis Made Easy. 2019webCEMiTool: Co-expression Modular Analysis Made Easy.
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SerpinB2 inhibits migration and promotes a resolution phase signature in large peritoneal macrophages. 2019SerpinB2 inhibits migration and promotes a resolution phase signature in large peritoneal macrophages.
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Molecular degree of perturbation of plasma inflammatory markers associated with tuberculosis reveals distinct disease profiles between Indian and Chinese populations. 2019Molecular degree of perturbation of plasma inflammatory markers associated with tuberculosis reveals distinct disease profiles between Indian and Chinese populations.
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Predicting RNA Families in Nucleotide Sequences Using StructRNAfinder. 2019Predicting RNA Families in Nucleotide Sequences Using StructRNAfinder.
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Assessing the Impact of Sample Heterogeneity on Transcriptome Analysis of Human Diseases Using MDP Webtool. 2019Assessing the Impact of Sample Heterogeneity on Transcriptome Analysis of Human Diseases Using MDP Webtool.
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Integrative Biology Approaches Applied to Human Diseases 2019Integrative Biology Approaches Applied to Human Diseases
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CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses. 2018CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses.
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Building capacity for advances in tuberculosis research; proceedings of the third RePORT international meeting. 2018Building capacity for advances in tuberculosis research; proceedings of the third RePORT international meeting.
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Gene regulatory and signaling networks exhibit distinct topological distributions of motifs. 2018Gene regulatory and signaling networks exhibit distinct topological distributions of motifs.
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Genetic sequence characterization and naturally acquired immune response to Plasmodium vivax Rhoptry Neck Protein 2 (PvRON2). 2018Genetic sequence characterization and naturally acquired immune response to Plasmodium vivax Rhoptry Neck Protein 2 (PvRON2).
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TGF-β signalling defect is linked to low CD39 expression on regulatory T cells and methotrexate resistance in rheumatoid arthritis. 2018TGF-β signalling defect is linked to low CD39 expression on regulatory T cells and methotrexate resistance in rheumatoid arthritis.
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In situ Immune Signatures and Microbial Load at the Nasopharyngeal Interface in Children With Acute Respiratory Infection 2018In situ Immune Signatures and Microbial Load at the Nasopharyngeal Interface in Children With Acute Respiratory Infection
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StructRNAfinder: an automated pipeline and web server for RNA families prediction. 2018StructRNAfinder: an automated pipeline and web server for RNA families prediction.
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Systems Immunology 2018Systems Immunology
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Calcium/calmodulin-dependent kinase kinase 2 regulates hematopoietic stem and progenitor cell regeneration. 2017Calcium/calmodulin-dependent kinase kinase 2 regulates hematopoietic stem and progenitor cell regeneration.
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Blood Gene Signatures of Chagas Cardiomyopathy With or Without Ventricular Dysfunction. 2017Blood Gene Signatures of Chagas Cardiomyopathy With or Without Ventricular Dysfunction.
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Systems Immunology of Diabetes-Tuberculosis Comorbidity Reveals Signatures of Disease Complications. 2017Systems Immunology of Diabetes-Tuberculosis Comorbidity Reveals Signatures of Disease Complications.
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Integration of miRNA and gene expression profiles suggest a role for miRNAs in the pathobiological processes of acute Trypanosoma cruzi infection. 2017Integration of miRNA and gene expression profiles suggest a role for miRNAs in the pathobiological processes of acute Trypanosoma cruzi infection.
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Toxicogenomic and bioinformatics platforms to identify key molecular mechanisms of a curcumin-analogue DM-1 toxicity in melanoma cells. 2017Toxicogenomic and bioinformatics platforms to identify key molecular mechanisms of a curcumin-analogue DM-1 toxicity in melanoma cells.
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Down-regulation of 14q32-encoded miRNAs and tumor suppressor role for miR-654-3p in papillary thyroid cancer. 2017Down-regulation of 14q32-encoded miRNAs and tumor suppressor role for miR-654-3p in papillary thyroid cancer.
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N-Methyl-d-Aspartate (NMDA) Receptor Blockade Prevents Neuronal Death Induced by Zika Virus Infection 2017N-Methyl-d-Aspartate (NMDA) Receptor Blockade Prevents Neuronal Death Induced by Zika Virus Infection
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Adjuvanting a Simian Immunodeficiency Virus Vaccine with Toll-Like Receptor Ligands Encapsulated in Nanoparticles Induces Persistent Antibody Responses and Enhanced Protection in TRIM5α Restrictive Macaques. 2017Adjuvanting a Simian Immunodeficiency Virus Vaccine with Toll-Like Receptor Ligands Encapsulated in Nanoparticles Induces Persistent Antibody Responses and Enhanced Protection in TRIM5α Restrictive Macaques.
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Systems Vaccinology Applied to DNA Vaccines: Perspective and Challenges. 2017Systems Vaccinology Applied to DNA Vaccines: Perspective and Challenges.
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Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription. 2007Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription.
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SerpinB2 Deficiency Results in a Stratum Corneum Defect and Increased Sensitivity to Topically Applied Inflammatory Agents. 2016SerpinB2 Deficiency Results in a Stratum Corneum Defect and Increased Sensitivity to Topically Applied Inflammatory Agents.
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Analysis of LexA binding sites and transcriptomics in response to genotoxic stress in Leptospira interrogans. 2016Analysis of LexA binding sites and transcriptomics in response to genotoxic stress in Leptospira interrogans.
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Antimicrobial peptide LL-37 participates in the transcriptional regulation of melanoma cells. 2016Antimicrobial peptide LL-37 participates in the transcriptional regulation of melanoma cells.
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Myeloperoxidase in human peripheral blood lymphocytes: Production and subcellular localization. 2016Myeloperoxidase in human peripheral blood lymphocytes: Production and subcellular localization.
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RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma. 2015RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma.
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Systems vaccinology: Enabling rational vaccine design with systems biological approaches. 2015Systems vaccinology: Enabling rational vaccine design with systems biological approaches.
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Synergy of Omeprazole and Praziquantel In Vitro Treatment against Schistosoma mansoni Adult Worms. 2015Synergy of Omeprazole and Praziquantel In Vitro Treatment against Schistosoma mansoni Adult Worms.
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MicroRNA Transcriptome Profiling in Heart of Trypanosoma cruzi-Infected Mice: Parasitological and Cardiological Outcomes. 2015MicroRNA Transcriptome Profiling in Heart of Trypanosoma cruzi-Infected Mice: Parasitological and Cardiological Outcomes.
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Vaccinology in the era of high-throughput biology. 2015Vaccinology in the era of high-throughput biology.
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Is the gut microbiome key to modulating vaccine efficacy? 2015Is the gut microbiome key to modulating vaccine efficacy?
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Chapter 15 - Systems Biology of Infectious Diseases and Vaccines 2014Chapter 15 - Systems Biology of Infectious Diseases and Vaccines
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Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells. 2014Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells.
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Multiple immune factors are involved in controlling acute and chronic chikungunya virus infection. 2014Multiple immune factors are involved in controlling acute and chronic chikungunya virus infection.
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CCR2 deficiency promotes exacerbated chronic erosive neutrophil-dominated chikungunya virus arthritis. 2014CCR2 deficiency promotes exacerbated chronic erosive neutrophil-dominated chikungunya virus arthritis.
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Gene signatures related to B-cell proliferation predict influenza vaccine-induced antibody response. 2014Gene signatures related to B-cell proliferation predict influenza vaccine-induced antibody response.
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Genetic control of immune response and susceptibility to infectious diseases. 2014Genetic control of immune response and susceptibility to infectious diseases.
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The role of prophage in plant-pathogenic bacteria. 2013The role of prophage in plant-pathogenic bacteria.
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Systems biological approaches to measure and understand vaccine immunity in humans. 2013Systems biological approaches to measure and understand vaccine immunity in humans.
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Immunity to viruses: learning from successful human vaccines. 2013Immunity to viruses: learning from successful human vaccines.
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Systems biology of vaccination in the elderly. 2013Systems biology of vaccination in the elderly.
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Repression of bacterial lipoprotein production by Francisella novicida facilitates evasion of innate immune recognition. 2012Repression of bacterial lipoprotein production by Francisella novicida facilitates evasion of innate immune recognition.
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Systems vaccinology: learning to compute the behavior of vaccine induced immunity. 2012Systems vaccinology: learning to compute the behavior of vaccine induced immunity.
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Systems vaccinology: its promise and challenge for HIV vaccine development. 2012Systems vaccinology: its promise and challenge for HIV vaccine development.
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Phenotype, function, and gene expression profiles of programmed death-1(hi) CD8 T cells in healthy human adults. 2011Phenotype, function, and gene expression profiles of programmed death-1(hi) CD8 T cells in healthy human adults.
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The iron stimulon of Xylella fastidiosa includes genes for type IV pilus and colicin V-like bacteriocins. 2008The iron stimulon of Xylella fastidiosa includes genes for type IV pilus and colicin V-like bacteriocins.
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Origins of the Xylella fastidiosa prophage-like regions and their impact in genome differentiation. 2008Origins of the Xylella fastidiosa prophage-like regions and their impact in genome differentiation.
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Conserved tissue expression signatures of intronic noncoding RNAs transcribed from human and mouse loci. 2008Conserved tissue expression signatures of intronic noncoding RNAs transcribed from human and mouse loci.
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Splice variants of TLE family genes and up-regulation of a TLE3 isoform in prostate tumors. 2007Splice variants of TLE family genes and up-regulation of a TLE3 isoform in prostate tumors.
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Concepts on Microarray Design for Genome and Transcriptome Analyses 2007Concepts on Microarray Design for Genome and Transcriptome Analyses
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Androgen responsive intronic non-coding RNAs. 2007Androgen responsive intronic non-coding RNAs.
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As antisense RNA gets intronic. 2005As antisense RNA gets intronic.
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RASL11A, member of a novel small monomeric GTPase gene family, is down-regulated in prostate tumors. 2004RASL11A, member of a novel small monomeric GTPase gene family, is down-regulated in prostate tumors.